Research output per year
Research output per year
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Dive into the research topics where Oliver Beckstein is active. These topic labels come from the works of this person. Together they form a unique fingerprint.
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Collaborations and top research areas from the last five years
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
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Kinetic Diagram Analysis: A Python Library for Calculating Steady-State Observables of Biochemical Systems Analytically
Awtrey, N. C. & Beckstein, O., Sep 10 2024, In: Journal of Chemical Theory and Computation. 20, 17, p. 7646-7666 21 p.Research output: Contribution to journal › Article › peer-review
Open Access -
Author Correction: Structure, mechanism and lipid-mediated remodeling of the mammalian Na+/H+ exchanger NHA2 (Nature Structural & Molecular Biology, (2022), 29, 2, (108-120), 10.1038/s41594-022-00738-2)
Matsuoka, R., Fudim, R., Jung, S., Zhang, C., Bazzone, A., Chatzikyriakidou, Y., Robinson, C. V., Nomura, N., Iwata, S., Landreh, M., Orellana, L., Beckstein, O. & Drew, D., Apr 2023, In: Nature Structural and Molecular Biology. 30, 4, p. 565 1 p.Research output: Contribution to journal › Comment/debate › peer-review
Open Access1 Scopus citations -
Energy coupling and stoichiometry of Zn2+/H+ antiport by the prokaryotic cation diffusion facilitator YiiP
Hussein, A., Fan, S., Lopez-Redondo, M., Kenney, I., Zhang, X., Beckstein, O. & Stokes, D. L., Oct 31 2023, In: eLife. 12Research output: Contribution to journal › Article › peer-review
Open Access4 Scopus citations -
Mechanism of substrate binding and transport in BASS transporters
Becker, P., Naughton, F., Brotherton, D., Pacheco-Gomez, R., Beckstein, O. & Cameron, A. D., Nov 14 2023, In: eLife. 12Research output: Contribution to journal › Article › peer-review
Open Access3 Scopus citations -
Thermodynamically consistent determination of free energies and rates in kinetic cycle models
Kenney, I. M. & Beckstein, O., Sep 13 2023, In: Biophysical Reports. 3, 3, 100120.Research output: Contribution to journal › Article › peer-review
Open Access3 Scopus citations
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POSE: Phase II: Building open source ecosystems in molecular sciences through collaboration and technology
Beckstein, O. (PI)
National Science Foundation (NSF)
10/1/23 → 9/30/25
Project: Research project
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Elements: Streaming Molecular Dynamics Simulation Trajectories for Direct Analysis: Applications to Sub-Picosecond Dynamics in Microsecond Simulations
Beckstein, O. (CoI) & Heyden, M. (PI)
National Science Foundation (NSF)
8/1/23 → 7/31/26
Project: Research project
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Membrane properties of the OHC system
Beckstein, O. (PI)
HHS: National Institutes of Health (NIH)
6/1/22 → 5/31/27
Project: Research project
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MDAnalysis: Faster, extensible molecular analysis for reproducible science
Beckstein, O. (PI)
1/15/22 → 11/30/24
Project: Research project
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CC Compute The Arizona Federated Open Research Computing Enclave AFORCE an Advanced Computing Platform for Science Engineering and Health
Sulc, P. (CoI), Herrmann, M. (CoI), Sankar, L. (CoI), Oswald, J. (CoI), Muhich, C. (CoI), Jennewein, D. (PI), Pfeifer, S. (CoI), Yang, Y. (CoI), Line, M. (CoI), Liang, J. (CoI), Ren, Y. (CoI), Singharoy, A. (CoI), Heyden, M. (CoI), Liu, Y. (CoI), Zheng, W. (CoI), Beckstein, O. (CoI), Jayasuriya, S. (CoI), Wang, Y. (CoI), Singh, A. (CoI), Ozkan, B. (CoI) & Jiao, Y. (CoI)
National Science Foundation (NSF)
10/1/21 → 9/30/24
Project: Research project
Datasets
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alchemistry/alchemlyb: 0.3.0
Beckstein, O. (Contributor), Zenodo, Aug 6 2019
DOI: 10.5281/zenodo.3361016, https://zenodo.org/record/3361016
Dataset
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alchemlyb: the simple alchemistry library
Hénin, J. (Contributor), Allen, B. K. (Contributor), Fan, S. (Contributor), Wu, Z. (Contributor), Hsu, W. (Contributor), Carter, H. A. (Contributor), Merz, P. T. (Contributor), Marson, D. (Contributor), Dotson, D. L. (Contributor), Schlaich, A. (Contributor), Lim, V. T. (Contributor), Barhaghi, M. S. (Contributor), Beckstein, O. (Contributor), Lee, H. (Contributor), Joseph, T. T. (Contributor), Alibay, I. (Contributor), Kenney, I. M. (Contributor), Janssen, J. (Contributor), Jensen, T. (Contributor), Shirts, M. R. (Contributor), Mobley, D. L. (Contributor), Li, H. (Contributor) & Clark, J. A. (Contributor), Zenodo, Sep 19 2024
DOI: 10.5281/zenodo.13799342, https://zenodo.org/records/13799342
Dataset
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Becksteinlab/numkit: Release 1.3.1
Dotson, D. L. (Contributor), Linke, M. (Contributor), Beckstein, O. (Contributor) & Heavey, T. J. (Contributor), Zenodo, Sep 19 2024
DOI: 10.5281/zenodo.13787965, https://zenodo.org/records/13787965
Dataset
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Crystal Structure of Rationally Designed OXA-48loop18 beta-lactamase
Dabos, L. (Contributor), Zavala, A. (Contributor), Bonnin, R. A. (Contributor), Beckstein, O. (Contributor), Retailleau, P. (Contributor), Iorga, B. I. (Contributor) & Naas, T. (Contributor), Protein Data Bank (PDB), Oct 9 2019
DOI: 10.2210/pdb6HOO/pdb, https://www.wwpdb.org/pdb?id=pdb_00006hoo
Dataset
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Crystal structure of the sodium proton antiporter, NapA
Lee, C. (Contributor), Kang, H. J. (Contributor), Von Ballmoos, C. (Contributor), Newstead, S. (Contributor), Uzdavinys, P. (Contributor), Dotson, D. L. (Contributor), Iwata, S. (Contributor), Beckstein, O. (Contributor), Cameron, A. D. (Contributor) & Drew, D. (Contributor), Protein Data Bank (PDB), Aug 28 2013
DOI: 10.2210/pdb4BWZ/pdb, https://www.wwpdb.org/pdb?id=pdb_00004bwz
Dataset