Work in progress - Java simulations of DSP algorithms for ion-channel sensors

Andreas Spanias; Peter Knee; Homin Kwon; Karthikeyan Natesan; Jayaraman Jayaraman; Photini Spanias

doi:10.1109/FIE.2008.4720669

Work in progress - Java simulations of DSP algorithms for ion-channel sensors

Andreas Spanias, Peter Knee, Homin Kwon, Karthikeyan Natesan, Jayaraman Jayaraman, Photini Spanias

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

4 Scopus citations

Abstract

The use of ion channels as sensing elements for chemical and biological agents is a rapidly developing area. Ion channels are proteins that mediate the flow of ions and molecules across membranes such as cell walls. At Arizona State University researchers have devised a silicon ion-channel sensor. Experiments have been conducted to characterize this sensor and examine its utility in various applications. This paper presents Java functions developed to demonstrate ion channel signals and their analysis using DSP functions in class. The Java functions were developed in the J-DSP visual programming environment. Students can experiment with ion-channel signals, extract features, and differentiate signals representing the presence of different analytes.

Original language	English (US)
Title of host publication	Proceedings - Frontiers in Education Conference, FIE
DOIs	https://doi.org/10.1109/FIE.2008.4720669
State	Published - 2008
Event	38th ASEE/IEEE Frontiers in Education Conference, FIE 2008 - Saratoga Springs, NY, United States Duration: Oct 22 2008 → Oct 25 2008

Other

Other	38th ASEE/IEEE Frontiers in Education Conference, FIE 2008
Country/Territory	United States
City	Saratoga Springs, NY
Period	10/22/08 → 10/25/08

Keywords

DSP
Educational software
Ion-channel signals

ASJC Scopus subject areas

Computer Science Applications
Software
Education

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10.1109/FIE.2008.4720669

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title = "Work in progress - Java simulations of DSP algorithms for ion-channel sensors",

abstract = "The use of ion channels as sensing elements for chemical and biological agents is a rapidly developing area. Ion channels are proteins that mediate the flow of ions and molecules across membranes such as cell walls. At Arizona State University researchers have devised a silicon ion-channel sensor. Experiments have been conducted to characterize this sensor and examine its utility in various applications. This paper presents Java functions developed to demonstrate ion channel signals and their analysis using DSP functions in class. The Java functions were developed in the J-DSP visual programming environment. Students can experiment with ion-channel signals, extract features, and differentiate signals representing the presence of different analytes.",

keywords = "DSP, Educational software, Ion-channel signals",

author = "Andreas Spanias and Peter Knee and Homin Kwon and Karthikeyan Natesan and Jayaraman Jayaraman and Photini Spanias",

year = "2008",

doi = "10.1109/FIE.2008.4720669",

language = "English (US)",

booktitle = "Proceedings - Frontiers in Education Conference, FIE",

note = "38th ASEE/IEEE Frontiers in Education Conference, FIE 2008 ; Conference date: 22-10-2008 Through 25-10-2008",

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TY - GEN

T1 - Work in progress - Java simulations of DSP algorithms for ion-channel sensors

AU - Spanias, Andreas

AU - Knee, Peter

AU - Kwon, Homin

AU - Natesan, Karthikeyan

AU - Jayaraman, Jayaraman

AU - Spanias, Photini

PY - 2008

Y1 - 2008

N2 - The use of ion channels as sensing elements for chemical and biological agents is a rapidly developing area. Ion channels are proteins that mediate the flow of ions and molecules across membranes such as cell walls. At Arizona State University researchers have devised a silicon ion-channel sensor. Experiments have been conducted to characterize this sensor and examine its utility in various applications. This paper presents Java functions developed to demonstrate ion channel signals and their analysis using DSP functions in class. The Java functions were developed in the J-DSP visual programming environment. Students can experiment with ion-channel signals, extract features, and differentiate signals representing the presence of different analytes.

AB - The use of ion channels as sensing elements for chemical and biological agents is a rapidly developing area. Ion channels are proteins that mediate the flow of ions and molecules across membranes such as cell walls. At Arizona State University researchers have devised a silicon ion-channel sensor. Experiments have been conducted to characterize this sensor and examine its utility in various applications. This paper presents Java functions developed to demonstrate ion channel signals and their analysis using DSP functions in class. The Java functions were developed in the J-DSP visual programming environment. Students can experiment with ion-channel signals, extract features, and differentiate signals representing the presence of different analytes.

KW - DSP

KW - Educational software

KW - Ion-channel signals

UR - http://www.scopus.com/inward/record.url?scp=78650758984&partnerID=8YFLogxK

UR - http://www.scopus.com/inward/citedby.url?scp=78650758984&partnerID=8YFLogxK

U2 - 10.1109/FIE.2008.4720669

DO - 10.1109/FIE.2008.4720669

M3 - Conference contribution

AN - SCOPUS:78650758984

BT - Proceedings - Frontiers in Education Conference, FIE

T2 - 38th ASEE/IEEE Frontiers in Education Conference, FIE 2008

Y2 - 22 October 2008 through 25 October 2008

ER -

Work in progress - Java simulations of DSP algorithms for ion-channel sensors

Abstract

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Keywords

ASJC Scopus subject areas

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