TY - GEN
T1 - Weakly-supervised learning-based feature localization for confocal laser endomicroscopy glioma images
AU - Izadyyazdanabadi, Mohammadhassan
AU - Belykh, Evgenii
AU - Cavallo, Claudio
AU - Zhao, Xiaochun
AU - Gandhi, Sirin
AU - Moreira, Leandro Borba
AU - Eschbacher, Jennifer
AU - Nakaji, Peter
AU - Preul, Mark C.
AU - Yang, Yezhou
N1 - Funding Information:
Acknowledgement. YY is partially supported by NSF grant #1750802. This work was supported by the Newsome Chair in Neurosurgery Research held by MCP and by funds from the Barrow Neurological Foundation. EB acknowledges SP-2044.2018.4.
Publisher Copyright:
© Springer Nature Switzerland AG 2018.
PY - 2018
Y1 - 2018
N2 - Confocal Laser Endomicroscopy (CLE) is novel handheld fluorescence imaging technology that has shown promise for rapid intraoperative diagnosis of brain tumor tissue. Currently CLE is capable of image display only and lacks an automatic system to aid the surgeon in diagnostically analyzing the images. The goal of this project was to develop a computer-aided diagnostic approach for CLE imaging of human glioma with feature localization function. Despite the tremendous progress in object detection and image segmentation methods in recent years, most of such methods require large annotated datasets for training. However, manual annotation of thousands of histopathology images by physicians is costly and time consuming. To overcome this problem, we constructed a Weakly-Supervised Learning (WSL)-based model for feature localization that trains on image-level annotations, and then localizes incidences of a class-of-interest in the test image. We developed a novel convolutional neural network for diagnostic features localization from CLE images by employing a novel multiscale activation map that is laterally inhibited and collaterally integrated. To validate our method, we compared the model output to the manual annotation performed by four neurosurgeons on test images. The model achieved 88% mean accuracy and 86% mean intersection over union on intermediate features and 87% mean accuracy and 88% mean intersection over union on restrictive fine features, while outperforming other state of the art methods tested. This system can improve accuracy and efficiency in characterization of CLE images of glioma tissue during surgery, and may augment intraoperative decision-making regarding the tumor margin and improve brain tumor resection.
AB - Confocal Laser Endomicroscopy (CLE) is novel handheld fluorescence imaging technology that has shown promise for rapid intraoperative diagnosis of brain tumor tissue. Currently CLE is capable of image display only and lacks an automatic system to aid the surgeon in diagnostically analyzing the images. The goal of this project was to develop a computer-aided diagnostic approach for CLE imaging of human glioma with feature localization function. Despite the tremendous progress in object detection and image segmentation methods in recent years, most of such methods require large annotated datasets for training. However, manual annotation of thousands of histopathology images by physicians is costly and time consuming. To overcome this problem, we constructed a Weakly-Supervised Learning (WSL)-based model for feature localization that trains on image-level annotations, and then localizes incidences of a class-of-interest in the test image. We developed a novel convolutional neural network for diagnostic features localization from CLE images by employing a novel multiscale activation map that is laterally inhibited and collaterally integrated. To validate our method, we compared the model output to the manual annotation performed by four neurosurgeons on test images. The model achieved 88% mean accuracy and 86% mean intersection over union on intermediate features and 87% mean accuracy and 88% mean intersection over union on restrictive fine features, while outperforming other state of the art methods tested. This system can improve accuracy and efficiency in characterization of CLE images of glioma tissue during surgery, and may augment intraoperative decision-making regarding the tumor margin and improve brain tumor resection.
KW - Brain tumor diagnosis
KW - Convolutional neural networks
KW - Deep learning
KW - Digital pathology
KW - Endomicroscopy
KW - Glioma
KW - Weakly-supervised localization
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U2 - 10.1007/978-3-030-00934-2_34
DO - 10.1007/978-3-030-00934-2_34
M3 - Conference contribution
AN - SCOPUS:85054095514
SN - 9783030009335
T3 - Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
SP - 300
EP - 308
BT - Medical Image Computing and Computer Assisted Intervention – MICCAI 2018 - 21st International Conference, 2018, Proceedings
A2 - Fichtinger, Gabor
A2 - Davatzikos, Christos
A2 - Alberola-López, Carlos
A2 - Frangi, Alejandro F.
A2 - Schnabel, Julia A.
PB - Springer Verlag
T2 - 21st International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2018
Y2 - 16 September 2018 through 20 September 2018
ER -