Experiences in creating an OSCAR package for mpiBLAST

Doug Jennewein

doi:10.1109/HPCS.2006.24

Experiences in creating an OSCAR package for mpiBLAST

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Abstract

Allowing computationally expensive database queries to be performed in parallel, mpiBLAST is an increasingly popular software tool for researchers in biology and bioinformatics. After struggling though a manual installation of mpiBIAST on an OSCAR cluster, our group wanted to simplify the task. This paper describes the process of creating the mpiBLAST OSCAR package.

Original language	English (US)
Title of host publication	20th International Symposium on High-Performance Computing in an Advanced Collaborative Environment, 2006. HPCS 2006
Pages	38
Number of pages	1
DOIs	https://doi.org/10.1109/HPCS.2006.24
State	Published - 2006
Externally published	Yes
Event	20th International Symposium on High-Performance Computing in an Advanced Collaborative Environment, 2006. HPCS 2006 - St. John's, NF, Canada Duration: May 14 2006 → May 17 2006

Publication series

Name	20th International Symposium on High-Performance Computing in an Advanced Collaborative Environment, 2006. HPCS 2006

Other

Other	20th International Symposium on High-Performance Computing in an Advanced Collaborative Environment, 2006. HPCS 2006
Country/Territory	Canada
City	St. John's, NF
Period	5/14/06 → 5/17/06

ASJC Scopus subject areas

General Engineering

Access to Document

10.1109/HPCS.2006.24

Cite this

Jennewein, D. (2006). Experiences in creating an OSCAR package for mpiBLAST. In 20th International Symposium on High-Performance Computing in an Advanced Collaborative Environment, 2006. HPCS 2006 (pp. 38). Article 1628229 (20th International Symposium on High-Performance Computing in an Advanced Collaborative Environment, 2006. HPCS 2006). https://doi.org/10.1109/HPCS.2006.24

Experiences in creating an OSCAR package for mpiBLAST. / Jennewein, Doug.
20th International Symposium on High-Performance Computing in an Advanced Collaborative Environment, 2006. HPCS 2006. 2006. p. 38 1628229 (20th International Symposium on High-Performance Computing in an Advanced Collaborative Environment, 2006. HPCS 2006).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Jennewein, D 2006, Experiences in creating an OSCAR package for mpiBLAST. in 20th International Symposium on High-Performance Computing in an Advanced Collaborative Environment, 2006. HPCS 2006., 1628229, 20th International Symposium on High-Performance Computing in an Advanced Collaborative Environment, 2006. HPCS 2006, pp. 38, 20th International Symposium on High-Performance Computing in an Advanced Collaborative Environment, 2006. HPCS 2006, St. John's, NF, Canada, 5/14/06. https://doi.org/10.1109/HPCS.2006.24

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Experiences in creating an OSCAR package for mpiBLAST

Abstract

Publication series

Other

ASJC Scopus subject areas

Access to Document

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Cite this