@article{fe0bdfce81ee4c8a9e1ca10bbf39312d,
title = "Clinical Genetics Lacks Standard Definitions and Protocols for the Collection and Use of Diversity Measures",
abstract = "Genetics researchers and clinical professionals rely on diversity measures such as race, ethnicity, and ancestry (REA) to stratify study participants and patients for a variety of applications in research and precision medicine. However, there are no comprehensive, widely accepted standards or guidelines for collecting and using such data in clinical genetics practice. Two NIH-funded research consortia, the Clinical Genome Resource (ClinGen) and Clinical Sequencing Evidence-generating Research (CSER), have partnered to address this issue and report how REA are currently collected, conceptualized, and used. Surveying clinical genetics professionals and researchers (n = 448), we found heterogeneity in the way REA are perceived, defined, and measured, with variation in the perceived importance of REA in both clinical and research settings. The majority of respondents (>55%) felt that REA are at least somewhat important for clinical variant interpretation, ordering genetic tests, and communicating results to patients. However, there was no consensus on the relevance of REA, including how each of these measures should be used in different scenarios and what information they can convey in the context of human genetics. A lack of common definitions and applications of REA across the precision medicine pipeline may contribute to inconsistencies in data collection, missing or inaccurate classifications, and misleading or inconclusive results. Thus, our findings support the need for standardization and harmonization of REA data collection and use in clinical genetics and precision health research.",
keywords = "CSER, ClinGen, ancestry, clinical genetics, diversity, ethnicity, precision medicine, race, survey",
author = "{Clinical Genome Resource (ClinGen) Ancestry and Diversity Working Group} and Popejoy, {Alice B.} and Crooks, {Kristy R.} and Fullerton, {Stephanie M.} and Hindorff, {Lucia A.} and Hooker, {Gillian W.} and Koenig, {Barbara A.} and Natalie Pino and Ramos, {Erin M.} and Ritter, {Deborah I.} and Hannah Wand and Wright, {Matt W.} and Michael Yudell and Zou, {James Y.} and Plon, {Sharon E.} and Bustamante, {Carlos D.} and Ormond, {Kelly E.}",
note = "Funding Information: Funding for this study was provided by the National Human Genome Research Institute (NHGRI) Clinical Genome Resource (ClinGen): 5U41HG009649-03; the Clinical Sequencing Evidence-generating Research (CSER) Coordinating Center: U24HG007307; the UCSF Program in Prenatal and Pediatric Genome Sequencing (P3EGS): U01HG009599; and a Chan-Zuckerberg Investigator Award (J.Y.Z.). Individuals who contributed to the development of this study through working group discussions and/or participation in refinement of the survey instrument include Vence Bonham, Eimear Kenney, Manuel Rivas, Jonathan Berg, Tim Thornton, Laura Amendola, Kate Foreman, Gail Jarvik, Mary Norton, Sarah Scollon, Jacqueline Odgis, and other anonymous contributors. Dissemination of the survey was supported by authors and the following individuals, on behalf of the affiliated organizations and consortia: Jeffrey Ou (CSER); Danielle Azzariti (ClinGen); Candice Miller (ABGC); Denise Calvert (ACMG); and Mona Miller (ASHG). Maria Cerezo (GWAS Catalog) and others contributed to targeted social media posts. Lauren Hicks and Catherine Gooch contributed a manually curated email list of publicly listed clinical geneticists. The authors appreciate feedback on earlier versions of this paper by attendees to the Stanford Center for Biomedical Ethics writing seminar. Funding Information: Funding for this study was provided by the National Human Genome Research Institute (NHGRI) Clinical Genome Resource (ClinGen): 5U41HG009649-03 ; the Clinical Sequencing Evidence-generating Research (CSER) Coordinating Center: U24HG007307 ; the UCSF Program in Prenatal and Pediatric Genome Sequencing (P3EGS): U01HG009599 ; and a Chan-Zuckerberg Investigator Award (J.Y.Z.). Publisher Copyright: {\textcopyright} 2020 The Authors",
year = "2020",
month = jul,
day = "2",
doi = "10.1016/j.ajhg.2020.05.005",
language = "English (US)",
volume = "107",
pages = "72--82",
journal = "American Journal of Human Genetics",
issn = "0002-9297",
publisher = "Cell Press",
number = "1",
}