@article{b5c15090759949739d386acae72ade60,
title = "Classifying the evolutionary and ecological features of neoplasms",
abstract = "Neoplasms change over time through a process of cell-level evolution, driven by genetic and epigenetic alterations. However, the ecology of the microenvironment of a neoplastic cell determines which changes provide adaptive benefits. There is widespread recognition of the importance of these evolutionary and ecological processes in cancer, but to date, no system has been proposed for drawing clinically relevant distinctions between how different tumours are evolving. On the basis of a consensus conference of experts in the fields of cancer evolution and cancer ecology, we propose a framework for classifying tumours that is based on four relevant components. These are the diversity of neoplastic cells (intratumoural heterogeneity) and changes over time in that diversity, which make up an evolutionary index (Evo-index), as well as the hazards to neoplastic cell survival and the resources available to neoplastic cells, which make up an ecological index (Eco-index). We review evidence demonstrating the importance of each of these factors and describe multiple methods that can be used to measure them. Development of this classification system holds promise for enabling clinicians to personalize optimal interventions based on the evolvability of the patient's tumour. The Evo-A nd Eco-indices provide a common lexicon for communicating about how neoplasms change in response to interventions, with potential implications for clinical trials, personalized medicine and basic cancer research.",
author = "Carlo Maley and Aktipis, {C Athena} and Graham, {Trevor A.} and Andrea Sottoriva and Boddy, {Amy M.} and Michalina Janiszewska and Silva, {Ariosto S.} and Marco Gerlinger and Yinyin Yuan and Pienta, {Kenneth J.} and Karen Anderson and Robert Gatenby and Charles Swanton and David Posada and Wu, {Chung I.} and Schiffman, {Joshua D.} and Hwang, {E. Shelley} and Kornelia Polyak and Anderson, {Alexander R.A.} and Brown, {Joel S.} and Mel Greaves and Darryl Shibata",
note = "Funding Information: Marsden/ICR National Institute of Health Research Biomedical Research Centre. M.Ge., M.Gr., Y.Y., and A.So. were also supported in part by the Wellcome Trust [105104/Z/14/Z]. J.D.S. holds the Edward B. Clark, MD Chair in Pediatric Research, and is supported by the Primary Children{\textquoteright}s Hospital (PCH) Pediatric Cancer Research Program, funded by the Intermountain Healthcare Foundation and the PCH Foundation. A.S. is supported by the Chris Rokos Fellowship in Evolution and Cancer. Y.Y. is a Cancer Research UK fellow and supported by The Royal Marsden/ICR National Institute of Health Research Biomedical Research Centre. E.S.H. was supported in part by PCORI grants 1505–30497 and 1503–29572, NIH grants R01 CA185138, T32 CA093245, and U10 CA180857, CDMRP Breast Cancer Research Program Award BC132057, a CRUK Grand Challenge grant, and the Breast Cancer Research Foundation. A.R.A.A. Funding Information: The consensus conference was supported by Wellcome Genome Campus Advanced Courses and Scientific Conferences. C.C.M. is supported in part by US NIH grants P01 CA91955, R01 CA149566, R01 CA170595, R01 CA185138 and R01 CA140657 as well as CDMRP Breast Cancer Research Program Award BC132057. M.J. is supported by NIH grant K99CA201606. K.S.A. is supported by NCI 5R21 CA196460. K. Polyak is supported by R35 CA197623, U01 CA195469, U54 CA193461, and the Breast Cancer Research Foundation. K.J.P. is supported by NIH grants CA143803, CA163124, CA093900 and CA143055. D.P. is supported by the European Research Council (ERC-617457-PHYLOCANCER), the Spanish Ministry of Economy and Competitiveness (BFU2015-63774-P) and the Education, Culture and University Development Department of the Galician Government. K.S.A. is supported in part by the Breast Cancer Research Foundation and NCI R21CA196460. C.S. is supported by the Royal Society, Cancer Research UK (FC001169), the UK Medical Research Council (FC001169), and the Wellcome Trust (FC001169), NovoNordisk Foundation (ID 16584), the Breast Cancer Research Foundation (BCRF), the European Research Council (THESEUS) and Marie Curie Network PloidyNet. T.A.G. is a Cancer Research UK fellow and a Wellcome Trust funded Investigator. E.S.H. is supported by R01 CA185138-01 and W81XWH-14-1-0473. M.Gerlinger is supported by Cancer Research UK and The Royal Funding Information: We convened a consensus conference of experts in the fields of cancer evolution and cancer ecology to lay the groundwork for the development of an evolutionary and ecological classification system. The initial participants (Maley, Aktipis, Graham, Sottoriva, Boddy, Janiszewska, Silva, Gerlinger, Anderson, Brown and Shibata) were among the faculty for the Evolution and Ecology of Cancer summer school funded by Wellcome and held at the Wellcome Genome Campus in Hinxton, UK, in July of 2016. Input from all participants was solicited, and after discussion, we identified areas of consensus. Afterwards, other leaders in the field were invited to join the effort by coediting and discussing the developing statement. All authors reviewed and approved the final statement. Wellcome Genome Campus Advanced Courses and Scientific Conferences provided financial support for the consensus meeting. We have named the classification system, with their permission, in Publisher Copyright: {\textcopyright} 2017 Macmillan Publishers Limited, part of Springer Nature.",
year = "2017",
month = oct,
day = "1",
doi = "10.1038/nrc.2017.69",
language = "English (US)",
volume = "17",
pages = "605--619",
journal = "Nature Reviews Cancer",
issn = "1474-175X",
publisher = "Nature Publishing Group",
number = "10",
}