TY - JOUR
T1 - An epigenetic clock analysis of race/ethnicity, sex, and coronary heart disease
AU - Horvath, Steve
AU - Gurven, Michael
AU - Levine, Morgan E.
AU - Trumble, Benjamin C.
AU - Kaplan, Hillard
AU - Allayee, Hooman
AU - Ritz, Beate R.
AU - Chen, Brian
AU - Lu, Ake T.
AU - Rickabaugh, Tammy M.
AU - Jamieson, Beth D.
AU - Sun, Dianjianyi
AU - Li, Shengxu
AU - Chen, Wei
AU - Quintana-Murci, Lluis
AU - Fagny, Maud
AU - Kobor, Michael S.
AU - Tsao, Philip S.
AU - Reiner, Alexander P.
AU - Edlefsen, Kerstin L.
AU - Absher, Devin
AU - Assimes, Themistocles L.
N1 - Funding Information:
This study was supported by NIH/NHLBI 60442456 BAA23 (Assimes, Absher, Horvath), National Institutes of Health NIH/NIA 1U34AG051425-01 (Horvath). The WHI program is funded by the National Heart, Lung, and Blood Institute, National Institutes of Health, U.S. Department of Health and Human Services through contracts HHSN268201100046C, HHSN268201100001C, HHSN268201100002C, HHSN268201100003C, HHSN268201100004C, and HHSN271201100004C. The PEG data were supported by NIEHS RO1ES10544 (Ritz) and NIEHS R21 ES024356 (Horvath, Ritz). Gurven and Trumble were funded by NIH/NIA R01AG024119 and R56AG02411. The Religious Order study and Rush Memory and Aging Project (brain dataset 6) were funded by P30AG10161, R01AG17917, RF1AG15819, and R01AG36042.
Funding Information:
One of our flow datasets was collected by the Multicenter AIDS Cohort Study (MACS) at UCLA (Principal Investigators, Roger Detels and Otoniel Martinez-Maza), U01-AI35040. The MACS is funded primarily by the National Institute of Allergy and Infectious Diseases (NIAID) with additional co-funding from the National Cancer Institute (NCI P30 CA016042), the National Institute on Drug Abuse (NIDA 5P30 AI028697), the National Institute of Mental Health (NIMH), the National Institute on Aging (NIA Grant 1RO1-AG-030327 by BDJ), and UL1-TR000424 (JHU CTSA). The content is solely the responsibility of the authors and does not necessarily represent the official views of the National Institutes of Health or donors to the David Geffen School of Medicine. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
Publisher Copyright:
© 2016 The Author(s).
PY - 2016/8/11
Y1 - 2016/8/11
N2 - Background: Epigenetic biomarkers of aging (the "epigenetic clock") have the potential to address puzzling findings surrounding mortality rates and incidence of cardio-metabolic disease such as: (1) women consistently exhibiting lower mortality than men despite having higher levels of morbidity; (2) racial/ethnic groups having different mortality rates even after adjusting for socioeconomic differences; (3) the black/white mortality cross-over effect in late adulthood; and (4) Hispanics in the United States having a longer life expectancy than Caucasians despite having a higher burden of traditional cardio-metabolic risk factors. Results: We analyzed blood, saliva, and brain samples from seven different racial/ethnic groups. We assessed the intrinsic epigenetic age acceleration of blood (independent of blood cell counts) and the extrinsic epigenetic aging rates of blood (dependent on blood cell counts and tracks the age of the immune system). In blood, Hispanics and Tsimane Amerindians have lower intrinsic but higher extrinsic epigenetic aging rates than Caucasians. African-Americans have lower extrinsic epigenetic aging rates than Caucasians and Hispanics but no differences were found for the intrinsic measure. Men have higher epigenetic aging rates than women in blood, saliva, and brain tissue. Conclusions: Epigenetic aging rates are significantly associated with sex, race/ethnicity, and to a lesser extent with CHD risk factors, but not with incident CHD outcomes. These results may help elucidate lower than expected mortality rates observed in Hispanics, older African-Americans, and women.
AB - Background: Epigenetic biomarkers of aging (the "epigenetic clock") have the potential to address puzzling findings surrounding mortality rates and incidence of cardio-metabolic disease such as: (1) women consistently exhibiting lower mortality than men despite having higher levels of morbidity; (2) racial/ethnic groups having different mortality rates even after adjusting for socioeconomic differences; (3) the black/white mortality cross-over effect in late adulthood; and (4) Hispanics in the United States having a longer life expectancy than Caucasians despite having a higher burden of traditional cardio-metabolic risk factors. Results: We analyzed blood, saliva, and brain samples from seven different racial/ethnic groups. We assessed the intrinsic epigenetic age acceleration of blood (independent of blood cell counts) and the extrinsic epigenetic aging rates of blood (dependent on blood cell counts and tracks the age of the immune system). In blood, Hispanics and Tsimane Amerindians have lower intrinsic but higher extrinsic epigenetic aging rates than Caucasians. African-Americans have lower extrinsic epigenetic aging rates than Caucasians and Hispanics but no differences were found for the intrinsic measure. Men have higher epigenetic aging rates than women in blood, saliva, and brain tissue. Conclusions: Epigenetic aging rates are significantly associated with sex, race/ethnicity, and to a lesser extent with CHD risk factors, but not with incident CHD outcomes. These results may help elucidate lower than expected mortality rates observed in Hispanics, older African-Americans, and women.
KW - Aging
KW - Black/white mortality cross-over
KW - Coronary heart disease
KW - DNA methylation
KW - Epigenetic clock
KW - Gender
KW - Hispanic paradox
KW - Race
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U2 - 10.1186/s13059-016-1030-0
DO - 10.1186/s13059-016-1030-0
M3 - Article
C2 - 27511193
AN - SCOPUS:84981165311
SN - 1474-7596
VL - 17
JO - Genome biology
JF - Genome biology
IS - 1
M1 - 171
ER -