Reed Cartwright

h-index

Research activity per year

Fingerprint

Dive into the research topics where Reed Cartwright is active. These topic labels come from the works of this person. Together they form a unique fingerprint.

1 Similar Profiles

42 Article
1 Comment/debate
1 Letter
1 Patent

COATi: Statistical Pairwise Alignment of Protein-Coding Sequences
García Mesa, J. J., Zhu, Z. & Cartwright, R. A., Jul 1 2024, In: Molecular biology and evolution. 41, 7, msae117.
Research output: Contribution to journal › Article › peer-review

Open Access
Bifidobacteria define gut microbiome profiles of golden lion tamarin (Leontopithecus rosalia) and marmoset (Callithrix sp.) metagenomic shotgun pools
Malukiewicz, J., D’arc, M., Dias, C. A., Cartwright, R. A., Grativol, A. D., Moreira, S. B., Souza, A. R., Tavares, M. C. H., Pissinatti, A., Ruiz-Miranda, C. R. & Santos, A. F. A., Dec 2023, In: Scientific reports. 13, 1, 15679.
Research output: Contribution to journal › Article › peer-review

Open Access
6 Link opens in a new tab Scopus citations
Expanding the stdpopsim species catalog, and lessons learned for realistic genome simulations
Lauterbur, M. E., Cavassim, M. I. A., Gladstein, A. L., Gower, G., Pope, N. S., Tsambos, G., Adrion, J., Belsare, S., Biddanda, A., Caudill, V., Cury, J., Echevarria, I., Haller, B. C., Hasan, A. R., Huang, X., Iasi, L. N. M., Noskova, E., Obsteter, J., Pavinato, V. A. C. & Pearson, A. & 22 others, Peede, D., Perez, M. F., Rodrigues, M. F., Smith, C. C. R., Spence, J. P., Teterina, A., Tittes, S., Unneberg, P., Vazquez, J. M., Waples, R. K., Wohns, A. W., Wong, Y., Baumdicker, F., Cartwright, R. A., Gorjanc, G., Gutenkunst, R. N., Kelleher, J., Kern, A. D., Ragsdale, A. P., Ralph, P. L., Schrider, D. R. & Gronau, I., Jun 21 2023, In: eLife. 12
Research output: Contribution to journal › Article › peer-review

Open Access
25 Link opens in a new tab Scopus citations
Federated learning and Indigenous genomic data sovereignty
Boscarino, N., Cartwright, R. A., Fox, K. & Tsosie, K. S., Nov 2022, In: Nature Machine Intelligence. 4, 11, p. 909-911 3 p.
Research output: Contribution to journal › Comment/debate › peer-review

Open Access

27 Link opens in a new tab Scopus citations
Genie: an interactive real-time simulation for teaching genetic drift
Castillo, A. I., Roos, B. H., Rosenberg, M. S., Cartwright, R. A. & Wilson, M. A., Dec 2022, In: Evolution: Education and Outreach. 15, 1, 3.
Research output: Contribution to journal › Article › peer-review

Open Access
4 Link opens in a new tab Scopus citations

IIBR Informatics: Integrating codon evolution and sequence-assembly error models into multiple sequence alignment
Cartwright, R. (PI)
National Science Foundation (NSF)
6/15/19 → 5/31/25
Project: Research project
Analysis of de novo mutation from sequencing of related individuals and cells.
Cartwright, R. (PI)
HHS: National Institutes of Health (NIH)
7/1/18 → 2/29/20
Project: Research project
Estimating Insertions and Deletions Across the Tree of Life
Cartwright, R. (PI)
United States-Israel Binational Science Foundation
10/1/16 → 9/30/20
Project: Research project
ABI Innovation: Identifying phylogenetically informative data from next generation sequencing
Cartwright, R. (PI)
NSF: Directorate for Biological Sciences (BIO)
8/1/14 → 7/31/18
Project: Research project
Analysis of de novo mutation from sequencing of related individuals and cells
Cartwright, R. (PI)
HHS: National Institutes of Health (NIH)
5/8/14 → 5/29/18
Project: Research project

Additional file 14 of Genie: an interactive real-time simulation for teaching genetic drift
Castillo, A. I. (Creator), Roos, B. H. (Creator), Rosenberg, M. S. (Creator), Cartwright, R. A. (Creator) & Wilson, M. A. (Creator), Figshare, 2022
DOI: 10.6084/m9.figshare.19211644.v1, https://springernature.figshare.com/articles/journal_contribution/Additional_file_14_of_Genie_an_interactive_real-time_simulation_for_teaching_genetic_drift/19211644/1
Dataset
Mitogenomic phylogeny of Callithrix with special focus on human transferred taxa
Malukiewicz, J. (Creator), Cartwright, R. A. (Creator), Curi, N. H. A. (Creator), Dergam, J. A. (Creator), Igayara, C. S. (Creator), Moreira, S. B. (Creator), Molina, C. V. (Creator), Nicola, P. A. (Creator), Noll, A. (Creator), Passamani, M. (Creator), Pereira, L. C. M. (Contributor), Pissinatti, A. (Creator), Ruiz-Miranda, C. R. (Creator), Silva, D. L. (Creator), Stone, A. C. (Creator), Zinner, D. (Creator) & Roos, C. (Creator), figshare Academic Research System, 2021
DOI: 10.6084/m9.figshare.c.5367177.v1, https://springernature.figshare.com/collections/Mitogenomic_phylogeny_of_Callithrix_with_special_focus_on_human_transferred_taxa/5367177/1
Dataset
Additional file 8 of Genie: an interactive real-time simulation for teaching genetic drift
Castillo, A. I. (Creator), Roos, B. H. (Creator), Rosenberg, M. S. (Creator), Cartwright, R. A. (Creator) & Wilson, M. A. (Creator), Figshare, 2022
DOI: 10.6084/m9.figshare.19211671.v1, https://springernature.figshare.com/articles/dataset/Additional_file_8_of_Genie_an_interactive_real-time_simulation_for_teaching_genetic_drift/19211671/1
Dataset
Genie: an interactive real-time simulation for teaching genetic drift
Castillo, A. I. (Creator), Roos, B. H. (Creator), Rosenberg, M. S. (Creator), Cartwright, R. A. (Creator) & Wilson, M. A. (Creator), Figshare, 2022
DOI: 10.6084/m9.figshare.c.5853559.v1, https://springernature.figshare.com/collections/Genie_an_interactive_real-time_simulation_for_teaching_genetic_drift/5853559/1
Dataset
Additional file 3 of Genie: an interactive real-time simulation for teaching genetic drift
Castillo, A. I. (Creator), Roos, B. H. (Creator), Rosenberg, M. S. (Creator), Cartwright, R. A. (Creator) & Wilson, M. A. (Creator), Figshare, 2022
DOI: 10.6084/m9.figshare.19211656.v1, https://springernature.figshare.com/articles/dataset/Additional_file_3_of_Genie_an_interactive_real-time_simulation_for_teaching_genetic_drift/19211656/1
Dataset

Reed Cartwright

Fingerprint

Collaborations and top research areas from the last five years

Dive into details

COATi: Statistical Pairwise Alignment of Protein-Coding Sequences

Bifidobacteria define gut microbiome profiles of golden lion tamarin (Leontopithecus rosalia) and marmoset (Callithrix sp.) metagenomic shotgun pools

Expanding the stdpopsim species catalog, and lessons learned for realistic genome simulations

Federated learning and Indigenous genomic data sovereignty

Genie: an interactive real-time simulation for teaching genetic drift

IIBR Informatics: Integrating codon evolution and sequence-assembly error models into multiple sequence alignment

Analysis of de novo mutation from sequencing of related individuals and cells.

Estimating Insertions and Deletions Across the Tree of Life

ABI Innovation: Identifying phylogenetically informative data from next generation sequencing

Analysis of de novo mutation from sequencing of related individuals and cells

Additional file 14 of Genie: an interactive real-time simulation for teaching genetic drift

Mitogenomic phylogeny of Callithrix with special focus on human transferred taxa

Additional file 8 of Genie: an interactive real-time simulation for teaching genetic drift

Genie: an interactive real-time simulation for teaching genetic drift

Additional file 3 of Genie: an interactive real-time simulation for teaching genetic drift

Reed Cartwright

Fingerprint

Collaborations and top research areas from the last five years

Research output

Projects

Datasets