IAFSE-SCAI Centers

Search results

• Disease gene prioritization by integrating tissue-specific molecular networks using a robust multi-network model

  Ni, J. (Contributor), Koyuturk, M. (Creator), Tong, H. (Contributor), Haines, J. (Creator), Xu, R. (Creator), Zhang, X. (Creator) & Hanghang, T. (Contributor), Figshare, 2016

  DOI: 10.6084/m9.figshare.c.3618746, https://figshare.com/collections/Disease_gene_prioritization_by_integrating_tissue-specific_molecular_networks_using_a_robust_multi-network_model/3618746

  Dataset

• Dynamic Multivariate Functional Data Modeling via Sparse Subspace Learning

  Zhang, C. (Creator), Yan, H. (Creator), Lee, S. (Creator) & Shi, J. (Creator), Taylor & Francis, 2020

  DOI: 10.6084/m9.figshare.12844311.v1, https://tandf.figshare.com/articles/dataset/Dynamic_Multivariate_Functional_Data_Modeling_via_Sparse_Subspace_Learning/12844311/1

  Dataset

• A Bayesian Partially Observable Online Change Detection Approach with Thompson Sampling

  Guo, J. (Creator), Yan, H. (Creator) & Zhang, C. (Creator), Taylor & Francis, 2022

  DOI: 10.6084/m9.figshare.21197987, https://tandf.figshare.com/articles/dataset/A_Bayesian_Partially_Observable_Online_Change_Detection_Approach_with_Thompson_Sampling/21197987

  Dataset

• A Bayesian Partially Observable Online Change Detection Approach with Thompson Sampling

  Guo, J. (Creator), Yan, H. (Creator) & Zhang, C. (Creator), Taylor & Francis, 2022

  DOI: 10.6084/m9.figshare.21197987.v1, https://tandf.figshare.com/articles/dataset/A_Bayesian_Partially_Observable_Online_Change_Detection_Approach_with_Thompson_Sampling/21197987/1

  Dataset

• AKM2D: An adaptive framework for online sensing and anomaly quantification

  Shi, J. (Contributor), Yan, H. (Contributor) & Paynabar, K. (Contributor), figshare Academic Research System, Sep 1 2020

  DOI: 10.6084/m9.figshare.10687493.v1, https://doi.org/10.6084%2Fm9.figshare.10687493.v1

  Dataset

• How do machine-generated questions compare to human-generated questions?

  Zhang, L. (Contributor), VanLehn, K. (Creator) & Lishan, Z. (Contributor), figshare Academic Research System, 2016

  DOI: 10.6084/m9.figshare.c.3698098.v1, https://figshare.com/collections/How_do_machine-generated_questions_compare_to_human-generated_questions_/3698098/1

  Dataset

• Additional file 2 of Disease gene prioritization by integrating tissue-specific molecular networks using a robust multi-network model

  Xu, R. (Contributor), Zhang, X. (Contributor), Ni, J. (Contributor), Haines, J. (Contributor), Koyuturk, M. (Contributor) & Tong, H. (Contributor), figshare Academic Research System, Nov 10 2016

  DOI: 10.6084/m9.figshare.c.3618746_d3.v1, https://doi.org/10.6084%2Fm9.figshare.c.3618746_d3.v1

  Dataset

• Disease gene prioritization by integrating tissue-specific molecular networks using a robust multi-network model

  Ni, J. (Contributor), Koyuturk, M. (Creator), Tong, H. (Contributor), Haines, J. (Creator), Xu, R. (Creator), Zhang, X. (Creator) & Hanghang, T. (Contributor), figshare Academic Research System, 2016

  DOI: 10.6084/m9.figshare.c.3618746.v1, https://figshare.com/collections/Disease_gene_prioritization_by_integrating_tissue-specific_molecular_networks_using_a_robust_multi-network_model/3618746/1

  Dataset

• 4ET8 : Hen egg-white lysozyme solved from 40 fs free-electron laser pulse data

  Doak, R. B. (Contributor), Barends, T. R. M. (Contributor), Shoeman, R. L. (Contributor), Schlichting, I. (Contributor), Fromme, P. (Contributor), Hunter, M. S. (Contributor), Kupitz, C. (Contributor), Messerschmidt, M. (Contributor), Redecke, L. (Contributor), Seibert, M. M. (Contributor), White, T. A. (Contributor), Zatsepin, N. (Contributor), Chapman, H. (Contributor), Barty, A. (Contributor), Schafer, D. W. (Contributor), Bogan, M. J. (Contributor), Williams, G. J. (Contributor) & Boutet, S. (Contributor), RCSB-PDB, 2012

  DOI: 10.2210/pdb4et8/pdb, https://www.rcsb.org/structure/4ET8

  Dataset

• 4QX2 : Cry3A Toxin structure obtained by injecting Bacillus thuringiensis cells in an XFEL beam, collecting data by serial femtosecond crystallographic methods and processing data with the cctbx.xfel software suite

  Sawaya, M. R. (Contributor), Cascio, D. (Contributor), Gingery, M. (Contributor), Rodriguez, J. (Contributor), Goldschmidt, L. (Contributor), Colletier, J. (Contributor), Messerschmidt, M. (Contributor), Boutet, S. (Contributor), Koglin, J. E. (Contributor), Williams, G. J. (Contributor), Brewster, A. S. (Contributor), Nass, K. (Contributor), Hattne, J. (Contributor), Botha, S. (Contributor), Doak, R. B. (Contributor), Shoeman, R. L. (Contributor), DePonte, D. P. (Contributor), Park, H. (Contributor), Federici, B. A. (Contributor), Sauter, N. K. (Contributor), Schlichting, I. (Contributor) & Eisenberg, D. S. (Contributor), RCSB-PDB, 2014

  DOI: 10.2210/pdb4qx2/pdb, https://www.rcsb.org/structure/4QX2

  Dataset

• 4HWY : Trypanosoma brucei procathepsin B solved from 40 fs free-electron laser pulse data by serial femtosecond X-ray crystallography

  Redecke, L. (Contributor), Nass, K. (Contributor), DePonte, D. P. (Contributor), White, T. A. (Contributor), Rehders, D. (Contributor), Barty, A. (Contributor), Stellato, F. (Contributor), Liang, M. (Contributor), Barends, T. R. M. (Contributor), Boutet, S. (Contributor), Williams, G. J. (Contributor), Messerschmidt, M. (Contributor), Seibert, M. M. (Contributor), Aquila, A. (Contributor), Arnlund, D. (Contributor), Bajt, S. (Contributor), Barth, T. B. (Contributor), Bogan, M. J. (Contributor), Caleman, C. (Contributor), Chao, T. (Contributor), Doak, R. B. (Contributor), Fleckenstein, H. (Contributor), Frank, M. (Contributor), Fromme, R. (Contributor), Galli, L. (Contributor), Grotjohann, I. (Contributor), Hunter, M. S. (Contributor), Johansson, L. C. (Contributor), Kassemeyer, S. (Contributor), Katona, G. (Contributor), Kirian, R. (Contributor), Koopmann, R. (Contributor), Kupitz, C. (Contributor), Lomb, L. (Contributor), Martin, A. V. (Contributor), Mogk, S. (Contributor), Neutze, R. (Contributor), Shoeman, R. L. (Contributor), Steinbrener, J. (Contributor), Timneanu, N. (Contributor), Wang, D. (Contributor), Weierstall, U. (Contributor), Zatsepin, N. A. (Contributor), Spence, J. C. H. (Contributor), Fromme, P. (Contributor), Schlichting, I. (Contributor), Duszenko, M. (Contributor), Betzel, C. (Contributor) & Chapman, H. N. (Contributor), RCSB-PDB, 2012

  DOI: 10.2210/pdb4hwy/pdb, https://www.rcsb.org/structure/4HWY

  Dataset

• 4N5R : Hen egg-white lysozyme phased using free-electron laser data

  Barends, T. R. M. (Contributor), Foucar, L. (Contributor), Botha, S. (Contributor), Doak, R. B. (Contributor), Shoeman, R. L. (Contributor), Nass, K. (Contributor), Koglin, J. E. (Contributor), Williams, G. J. (Contributor), Boutet, S. (Contributor), Messerschmidt, M. (Contributor) & Schlichting, I. (Contributor), RCSB-PDB, 2013

  DOI: 10.2210/pdb4n5r/pdb, https://www.rcsb.org/structure/4N5R

  Dataset

• 4QX0 : Cry3A Toxin structure obtained by Serial Femtosecond Crystallography from in vivo grown crystals isolated from Bacillus thuringiensis and data processed with the cctbx.xfel software suite

  Sawaya, M. R. (Contributor), Cascio, D. (Contributor), Gingery, M. (Contributor), Rodriguez, J. (Contributor), Goldschmidt, L. (Contributor), Colletier, J. (Contributor), Messerschmidt, M. (Contributor), Boutet, S. (Contributor), Koglin, J. E. (Contributor), Williams, G. J. (Contributor), Brewster, A. S. (Contributor), Nass, K. (Contributor), Hattne, J. (Contributor), Botha, S. (Contributor), Doak, R. B. (Contributor), Shoeman, R. L. (Contributor), DePonte, D. P. (Contributor), Park, H. (Contributor), Federici, B. A. (Contributor), Sauter, N. K. (Contributor), Schlichting, I. (Contributor) & Eisenberg, D. S. (Contributor), RCSB-PDB, 2014

  DOI: 10.2210/pdb4qx0/pdb, https://www.rcsb.org/structure/4QX0

  Dataset

• 4PBU : Serial Time-resolved crystallography of Photosystem II using a femtosecond X-ray laser The S1 state

  Kupitz, C. (Contributor), Basu, S. (Contributor), Grotjohann, I. (Contributor), Fromme, R. (Contributor), Zatsepin, N. A. (Contributor), Rendek, K. N. (Contributor), Hunter, M. S. (Contributor), Shoeman, R. L. (Contributor), White, T. A. (Contributor), Wang, D. (Contributor), James, D. (Contributor), Yang, J. (Contributor), Cobb, D. E. (Contributor), Reeder, B. (Contributor), Sierra, R. G. (Contributor), Liu, H. (Contributor), Barty, A. (Contributor), Aquila, A. L. (Contributor), Deponte, D. (Contributor), Kirian, R. (Contributor), Bari, S. (Contributor), Bergkamp, J. J. (Contributor), Beyerlein, K. R. (Contributor), Bogan, M. J. (Contributor), Caleman, C. (Contributor), Chao, T. (Contributor), Conrad, C. E. (Contributor), Davis, K. M. (Contributor), Fleckenstein, H. (Contributor), Galli, L. (Contributor), Hau-Riege, S. P. (Contributor), Kassemeyer, S. (Contributor), Laksmono, H. (Contributor), Liang, M. (Contributor), Lomb, L. (Contributor), Marchesini, S. (Contributor), Martin, A. V. (Contributor), Messerschmidt, M. (Contributor), Milathianaki, D. (Contributor), Nass, K. (Contributor), Ros, A. (Contributor), Roy-Chowdhury, S. (Contributor), Schmidt, K. (Contributor), Seibert, M. (Contributor), Steinbrener, J. (Contributor), Stellato, F. (Contributor), Yan, L. (Contributor), Yoon, C. (Contributor), Moore, T. (Contributor), Moore, A. (Contributor), Pushkar, Y. (Contributor), Williams, G. J. (Contributor), Boutet, S. (Contributor), Doak, R. B. (Contributor), Weierstall, U. (Contributor), Frank, M. (Contributor), Chapman, H. N. (Contributor), Spence, J. C. H. (Contributor) & Fromme, P. (Contributor), RCSB-PDB, 2014

  DOI: 10.2210/pdb4pbu/pdb, https://www.rcsb.org/structure/4PBU

  Dataset

• Assessing the stability and techno-economic implications for wet storage of harvested microalgae to manage seasonal variability

  Wendt, L. M. (Creator), Kinchin, C. (Creator), Wahlen, B. D. (Creator), Davis, R. (Creator), Dempster, T. A. (Creator), Gerken, H. (Creator) & Davis, R. (Creator), Figshare, 2019

  DOI: 10.6084/m9.figshare.c.4463753, https://springernature.figshare.com/collections/Assessing_the_stability_and_techno-economic_implications_for_wet_storage_of_harvested_microalgae_to_manage_seasonal_variability/4463753

  Dataset

• Assessing the stability and techno-economic implications for wet storage of harvested microalgae to manage seasonal variability

  Wendt, L. M. (Creator), Kinchin, C. (Creator), Wahlen, B. D. (Creator), Davis, R. (Creator), Dempster, T. A. (Creator), Gerken, H. (Creator) & Davis, R. (Creator), figshare Academic Research System, 2019

  DOI: 10.6084/m9.figshare.c.4463753.v1, https://springernature.figshare.com/collections/Assessing_the_stability_and_techno-economic_implications_for_wet_storage_of_harvested_microalgae_to_manage_seasonal_variability/4463753/1

  Dataset

• A Class of Hierarchical Multivariate Wiener Processes for Modeling Dependent Degradation Data

  Fang, G. (Creator) & Pan, R. (Creator), Taylor & Francis, 2023

  DOI: 10.6084/m9.figshare.23808098.v1, https://tandf.figshare.com/articles/dataset/A_Class_of_Hierarchical_Multivariate_Wiener_Processes_for_Modeling_Dependent_Degradation_Data/23808098/1

  Dataset

• Real-time detection of clustered events in video-imaging data with applications to additive manufacturing

  Colosimo, B. M. (Contributor), Grasso, M. (Contributor), Yan, H. (Contributor) & Paynabar, K. (Contributor), figshare Academic Research System, Jan 1 2021

  DOI: 10.6084/m9.figshare.13689955.v2, https://doi.org/10.6084%2Fm9.figshare.13689955.v2

  Dataset

• Dynamic Multivariate Functional Data Modeling via Sparse Subspace Learning

  Zhang, C. (Creator), Yan, H. (Creator), Lee, S. (Creator) & Shi, J. (Creator), figshare Academic Research System, 2021

  DOI: 10.6084/m9.figshare.12844311.v2, https://tandf.figshare.com/articles/dataset/Dynamic_Multivariate_Functional_Data_Modeling_via_Sparse_Subspace_Learning/12844311/2

  Dataset

• Additional file 1: of How do machine-generated questions compare to human-generated questions?

  VanLehn, K. (Contributor) & Zhang, L. (Contributor), figshare Academic Research System, Dec 1 2016

  DOI: 10.6084/m9.figshare.c.3698098_d1.v1, https://doi.org/10.6084%2Fm9.figshare.c.3698098_d1.v1

  Dataset

• Additional file 4 of Disease gene prioritization by integrating tissue-specific molecular networks using a robust multi-network model

  Haines, J. (Contributor), Koyuturk, M. (Contributor), Ni, J. (Contributor), Tong, H. (Contributor), Xu, R. (Contributor) & Zhang, X. (Contributor), figshare Academic Research System, Nov 10 2016

  DOI: 10.6084/m9.figshare.c.3618746_d1.v1, https://doi.org/10.6084%2Fm9.figshare.c.3618746_d1.v1

  Dataset

• 4CAS : Serial femtosecond crystallography structure of a photosynthetic reaction center

  Johansson, L. C. (Contributor), Arnlund, D. (Contributor), Katona, G. (Contributor), White, T. A. (Contributor), Barty, A. (Contributor), Deponte, D. P. (Contributor), Shoeman, R. L. (Contributor), Wickstrand, C. (Contributor), Sharma, A. (Contributor), Williams, G. J. (Contributor), Aquila, A. (Contributor), Bogan, M. J. (Contributor), Caleman, C. (Contributor), Davidsson, J. (Contributor), Doak, R. B. (Contributor), Frank, M. (Contributor), Fromme, R. (Contributor), Galli, L. (Contributor), Grotjohann, I. (Contributor), Hunter, M. S. (Contributor), Kassemeyer, S. (Contributor), Kirian, R. (Contributor), Kupitz, C. (Contributor), Liang, M. (Contributor), Lomb, L. (Contributor), Malmerberg, E. (Contributor), Martin, A. V. (Contributor), Messerschmidt, M. (Contributor), Nass, K. (Contributor), Redecke, L. (Contributor), Seibert, M. M. (Contributor), Sjöhamn, J. (Contributor), Steinbrener, J. (Contributor), Stellato, F. (Contributor), Wang, D. (Contributor), Wahlgren, W. Y. (Contributor), Weierstall, U. (Contributor), Westenhoff, S. (Contributor), Zatsepin, N. A. (Contributor), Boutet, S. (Contributor), Spence, J. C. H. (Contributor), Schlichting, I. (Contributor), Chapman, H. N. (Contributor), Fromme, P. (Contributor) & Neutze, R. (Contributor), RCSB-PDB, 2013

  DOI: 10.2210/pdb4cas/pdb, https://www.rcsb.org/structure/4CAS

  Dataset

• 4ZWJ : Crystal structure of rhodopsin bound to arrestin by femtosecond X-ray laser

  Kang, Y. (Contributor), Zhou, X. E. (Contributor), Gao, X. (Contributor), He, Y. (Contributor), Liu, W. (Contributor), Ishchenko, A. (Contributor), Barty, A. (Contributor), White, T. A. (Contributor), Yefanov, O. (Contributor), Han, G. W. (Contributor), Xu, Q. (Contributor), De Waal, P. W. (Contributor), Ke, J. (Contributor), Tan, M. H. E. (Contributor), Zhang, C. (Contributor), Moeller, A. (Contributor), West, G. M. (Contributor), Pascal, B. D. (Contributor), Van Eps, N. (Contributor), Caro, L. N. (Contributor), Vishnivetskiy, S. A. (Contributor), Lee, R. J. (Contributor), Suino-Powell, K. M. (Contributor), Gu, X. (Contributor), Pal, K. (Contributor), Ma, J. (Contributor), Zhi, X. (Contributor), Boutet, S. (Contributor), Williams, G. J. (Contributor), Messerschmidt, M. (Contributor), Gati, C. (Contributor), Zatsepin, N. A. (Contributor), Wang, D. (Contributor), James, D. (Contributor), Basu, S. (Contributor), Roy-Chowdhury, S. (Contributor), Conrad, C. E. (Contributor), Coe, J. (Contributor), Liu, H. (Contributor), Lisova, S. (Contributor), Kupitz, C. (Contributor), Grotjohann, I. (Contributor), Fromme, R. (Contributor), Jiang, Y. (Contributor), Tan, M. (Contributor), Yang, H. (Contributor), Li, J. (Contributor), Wang, M. (Contributor), Zheng, Z. (Contributor), Li, D. (Contributor), Howe, N. (Contributor), Zhao, Y. (Contributor), Standfuss, J. (Contributor), Diederichs, K. (Contributor), Dong, Y. (Contributor), Potter, C. S. (Contributor), Carragher, B. (Contributor), Caffrey, M. (Contributor), Jiang, H. (Contributor), Chapman, H. N. (Contributor), Spence, J. C. H. (Contributor), Fromme, P. (Contributor), Weierstall, U. (Contributor), Ernst, O. P. (Contributor), Katritch, V. (Contributor), Gurevich, V. V. (Contributor), Griffin, P. R. (Contributor), Hubbell, W. L. (Contributor), Stevens, R. C. (Contributor), Cherezov, V. (Contributor), Melcher, K. (Contributor) & Xu, H. E. (Contributor), RCSB-PDB, 2015

  DOI: 10.2210/pdb4zwj/pdb, https://www.rcsb.org/structure/4ZWJ

  Dataset

• 4O9R : Human Smoothened Receptor structure in complex with cyclopamine

  Wang, C. (Contributor), Han, G. W. (Contributor), Katritch, V. (Contributor), Cherezov, V. (Contributor), Stevens, R. C. (Contributor), Weierstall, U. (Contributor), James, D. (Contributor), White, T. A. (Contributor), Wang, D. (Contributor), Liu, W. (Contributor), Spence, J. C. H. (Contributor), Bruce Doak, D. R. (Contributor), Nelson, G. (Contributor), Fromme, P. (Contributor), Fromme, R. (Contributor), Grotjohann, I. (Contributor), Kupitz, C. (Contributor), Zatsepin, N. A. (Contributor), Liu, H. (Contributor), Basu, S. (Contributor), Wacker, D. (Contributor), Won Han, G. (Contributor), Boutet, S. (Contributor), Messerschmidt, M. (Contributor), Williams, G. J. (Contributor), Koglin, J. E. (Contributor), Marvin Seibert, S. M. (Contributor), Klinker, M. (Contributor), Gati, C. (Contributor), Shoeman, R. L. (Contributor), Barty, A. (Contributor), Chapman, H. N. (Contributor), Kirian, R. (Contributor), Beyerlein, K. R. (Contributor), Li, D. (Contributor), Shah, S. T. A. (Contributor), Howe, N. (Contributor) & Caffrey, M. (Contributor), RCSB-PDB, 2014

  DOI: 10.2210/pdb4o9r/pdb, https://www.rcsb.org/structure/4O9R

  Dataset

• Additional file 1 of Disease gene prioritization by integrating tissue-specific molecular networks using a robust multi-network model

  Haines, J. (Contributor), Zhang, X. (Contributor), Ni, J. (Contributor), Tong, H. (Contributor), Koyuturk, M. (Contributor) & Xu, R. (Contributor), figshare Academic Research System, Nov 10 2016

  DOI: 10.6084/m9.figshare.c.3618746_d2.v1, https://doi.org/10.6084%2Fm9.figshare.c.3618746_d2.v1

  Dataset