Research output per year
Research output per year
- 40 results
Search results
-
2024
Improved Throughput for All-or-Nothing Multicommodity Flows with Arbitrary Demands
Chaturvedi, A., Chekuri, C., Liu, M., Richa, A. W., Rost, M., Schmid, S. & Weber, J., Apr 1 2024, In: IEEE/ACM Transactions on Networking. 32, 2, p. 1435-1450 16 p.Research output: Contribution to journal › Article › peer-review
Open Access -
2023
Colloidal robotics
Liu, A. T., Hempel, M., Yang, J. F., Brooks, A. M., Pervan, A., Koman, V. B., Zhang, G., Kozawa, D., Yang, S., Goldman, D. I., Miskin, M. Z., Richa, A. W., Randall, D., Murphey, T. D., Palacios, T. & Strano, M. S., Dec 2023, In: Nature materials. 22, 12, p. 1453-1462 10 p.Research output: Contribution to journal › Article › peer-review
10 Scopus citations -
2022
Identification of a signature of evolutionarily conserved stress-induced mutagenesis in cancer
Cisneros, L. H., Vaske, C. & Bussey, K. J., Sep 6 2022, In: Frontiers in Genetics. 13, 932763.Research output: Contribution to journal › Article › peer-review
Open Access2 Scopus citations -
In Silico Investigations of Multi-Drug Adaptive Therapy Protocols
Thomas, D. S., Cisneros, L. H., Anderson, A. R. A. & Maley, C. C., Jun 1 2022, In: Cancers. 14, 11, 2699.Research output: Contribution to journal › Article › peer-review
Open Access5 Scopus citations -
Molecular classification and biomarkers of clinical outcome in breast ductal carcinoma in situ: Analysis of TBCRC 038 and RAHBT cohorts
Strand, S. H., Rivero-Gutiérrez, B., Houlahan, K. E., Seoane, J. A., King, L. M., Risom, T., Simpson, L. A., Vennam, S., Khan, A., Cisneros, L., Hardman, T., Harmon, B., Couch, F., Gallagher, K., Kilgore, M., Wei, S., DeMichele, A., King, T., McAuliffe, P. F. & Nangia, J. & 32 others, , Dec 12 2022, In: Cancer cell. 40, 12, p. 1521-1536.e7Research output: Contribution to journal › Article › peer-review
Open Access33 Scopus citations -
2021
A biological perspective on evolutionary computation
Miikkulainen, R. & Forrest, S., Jan 2021, In: Nature Machine Intelligence. 3, 1, p. 9-15 7 p.Research output: Contribution to journal › Article › peer-review
49 Scopus citations -
A new method to accurately identify single nucleotide variants using small FFPE breast samples
Fortunato, A., Mallo, D., Rupp, S. M., King, L. M., Hardman, T., Lo, J. Y., Hall, A., Marks, J. R., Hwang, E. S. & Maley, C. C., Nov 1 2021, In: Briefings in bioinformatics. 22, 6, bbab221.Research output: Contribution to journal › Article › peer-review
Open Access4 Scopus citations -
Improved Throughput for All-or-Nothing Multicommodity Flows with Arbitrary Demands
Chaturvedi, A., Chekuri, C., Richa, A. W., Rost, M., Schmid, S. & Weber, J., Dec 2021, In: Performance Evaluation Review. 49, 3, p. 22-27 6 p.Research output: Contribution to journal › Article › peer-review
3 Scopus citations -
Programming active cohesive granular matter with mechanically induced phase changes
Li, S., Dutta, B., Cannon, S., Daymude, J. J., Avinery, R., Aydin, E., Richa, A. W., Goldman, D. I. & Randall, D., Apr 21 2021, In: Science Advances. 7, 17, eabe8494.Research output: Contribution to journal › Article › peer-review
Open Access37 Scopus citations -
Real-time tracking of bacterial membrane vesicles reveals enhanced membrane traffic upon antibiotic exposure
Bos, J., Cisneros, L. H. & Mazel, D., Jan 20 2021, In: Science Advances. 7, 4, eabd1033.Research output: Contribution to journal › Article › peer-review
Open Access38 Scopus citations -
Upregulation of DNA repair genes and cell extrusion underpin the remarkable radiation resistance of Trichoplax adhaerens
Fortunato, A., Fleming, A., Aktipis, A. & Maley, C. C., Nov 2021, In: PLoS biology. 19, 11, e3001471.Research output: Contribution to journal › Article › peer-review
Open Access15 Scopus citations -
2020
GEVO: GPU Code Optimization Using Evolutionary Computation
Liou, J. Y., Wang, X., Forrest, S. & Wu, C. J., Nov 2020, In: ACM Transactions on Architecture and Code Optimization. 17, 4, 3418055.Research output: Contribution to journal › Article › peer-review
Open Access13 Scopus citations -
2019
Automatically Exploring Tradeoffs between Software Output Fidelity and Energy Costs
Dorn, J., Lacomis, J., Weimer, W. & Forrest, S., Mar 1 2019, In: IEEE Transactions on Software Engineering. 45, 3, p. 219-236 18 p., 8118155.Research output: Contribution to journal › Article › peer-review
13 Scopus citations -
Energy oversupply to tissues: A single mechanism possibly underlying multiple cancer risk factors
Wu, D. J., Aktipis, C. A. & Pepper, J. W., Jan 21 2019, In: Evolution, Medicine and Public Health. 2019, 1, p. 9-16 8 p.Research output: Contribution to journal › Article › peer-review
Open Access8 Scopus citations -
How does mobility help distributed systems compute?
Vining, W. F., Esponda, F., Moses, M. E. & Forrest, S., 2019, In: Philosophical Transactions of the Royal Society B: Biological Sciences. 374, 1774, 20180375.Research output: Contribution to journal › Article › peer-review
Open Access9 Scopus citations -
Social feeding behavior of Trichoplax adhaerens
Fortunato, A. & Aktipis, A., 2019, In: Frontiers in Ecology and Evolution. 7, FEB, 19.Research output: Contribution to journal › Article › peer-review
Open Access27 Scopus citations -
2018
Cross-cultural invariances in the architecture of shame
Sznycer, D., Xygalatas, D., Agey, E., Alami, S., An, X. F., Ananyeva, K. I., Atkinson, Q. D., Broitman, B. R., Conte, T. J., Flores, C., Fukushima, S., Hitokoto, H., Kharitonov, A. N., Onyishi, C. N., Onyishi, I. E., Romero, P. P., Schrock, J. M., Snodgrass, J. J., Sugiyama, L. S. & Takemura, K. & 6 others, , Sep 25 2018, In: Proceedings of the National Academy of Sciences of the United States of America. 115, 39, p. 9702-9707 6 p.Research output: Contribution to journal › Article › peer-review
Open Access97 Scopus citations -
Evolution of Barrett's esophagus through space and time at single-crypt and whole-biopsy levels
Martinez, P., Mallo, D., Paulson, T. G., Li, X., Sanchez, C. A., Reid, B. J., Graham, T. A., Kuhner, M. K. & Maley, C., Dec 1 2018, In: Nature communications. 9, 1, 794.Research output: Contribution to journal › Article › peer-review
Open Access41 Scopus citations -
Feedback enhances greening during disaster recovery: A model of social and ecological processes in neighborhood scale investment
Tidball, K. G. & Aktipis, C. A., Aug 2018, In: Urban Forestry and Urban Greening. 34, p. 269-280 12 p.Research output: Contribution to journal › Article › peer-review
17 Scopus citations -
Modeling the subclonal evolution of cancer cell populations
Chowell, D., Napier, J., Gupta, R., Anderson, K., Maley, C. & Wilson Sayres, M., Feb 1 2018, In: Cancer Research. 78, 3, p. 830-839 10 p.Research output: Contribution to journal › Article › peer-review
Open Access32 Scopus citations -
Prediction of Occult Invasive Disease in Ductal Carcinoma in Situ Using Deep Learning Features
Shi, B., Grimm, L. J., Mazurowski, M. A., Baker, J. A., Marks, J. R., King, L. M., Maley, C., Hwang, E. S. & Lo, J. Y., Mar 2018, In: Journal of the American College of Radiology. 15, 3, p. 527-534 8 p.Research output: Contribution to journal › Article › peer-review
63 Scopus citations -
The spatiotemporal evolution of lymph node spread in early breast cancer
Barry, P., Vatsiou, A., Spiteri, I., Nichol, D., Cresswell, G. D., Acar, A., Trahearn, N., Hrebien, S., Garcia-Murillas, I., Chkhaidze, K., Ermini, L., Huntingford, I. S., Cottom, H., Zabaglo, L., Koelble, K., Khalique, S., Rusby, J. E., Muscara, F., Dowsett, M. & Maley, C. & 5 others, , Oct 1 2018, In: Clinical Cancer Research. 24, 19, p. 4763-4770 8 p.Research output: Contribution to journal › Article › peer-review
Open Access26 Scopus citations -
2017
Can Occult Invasive Disease in Ductal Carcinoma In Situ Be Predicted Using Computer-extracted Mammographic Features?
Shi, B., Grimm, L. J., Mazurowski, M. A., Baker, J. A., Marks, J. R., King, L. M., Maley, C., Hwang, E. S. & Lo, J. Y., Sep 2017, In: Academic radiology. 24, 9, p. 1139-1147 9 p.Research output: Contribution to journal › Article › peer-review
19 Scopus citations -
Carbon dating cancer: Defining the chronology of metastatic progression in colorectal cancer
Lote, H., Spiteri, I., Ermini, L., Vatsiou, A., Roy, A., McDonald, A., Maka, N., Balsitis, M., Bose, N., Simbolo, M., Mafficini, A., Lampis, A., Hahne, J. C., Trevisani, F., Eltahir, Z., Mentrasti, G., Findlay, C., Kalkman, E. A. J., Punta, M. & Werner, B. & 10 others, , Jun 1 2017, In: Annals of Oncology. 28, 6, p. 1243-1249 7 p.Research output: Contribution to journal › Article › peer-review
Open Access22 Scopus citations -
Genomic instability in cancer: Teetering on the limit of tolerance
Andor, N., Maley, C. & Ji, H. P., May 1 2017, In: Cancer Research. 77, 9, p. 2179-2185 7 p.Research output: Contribution to journal › Article › peer-review
170 Scopus citations -
Natural selection in cancer biology: From molecular snowflakes to trait hallmarks
Fortunato, A., Boddy, A., Mallo, D., Aktipis, C. A., Maley, C. & Pepper, J. W., Feb 2017, In: Cold Spring Harbor Perspectives in Medicine. 7, 2, a029652.Research output: Contribution to journal › Article › peer-review
Open Access54 Scopus citations -
2016
Dynamic clonal equilibrium and predetermined cancer risk in Barrett's oesophagus
Martinez, P., Timmer, M. R., Lau, C. T., Calpe, S., Sancho-Serra, M. D. C., Straub, D., Baker, A. M., Meijer, S. L., Kate, F. J. W. T., Mallant-Hent, R. C., Naber, A. H. J., Van Oijen, A. H. A. M., Baak, L. C., Scholten, P., Böhmer, C. J. M., Fockens, P., Bergman, J. J. G. H. M., Maley, C., Graham, T. A. & Krishnadath, K. K., Aug 19 2016, In: Nature communications. 7, 12158.Research output: Contribution to journal › Article › peer-review
Open Access72 Scopus citations -
Pan-cancer analysis of the extent and consequences of intratumor heterogeneity
Andor, N., Graham, T. A., Jansen, M., Xia, L. C., Aktipis, C. A., Petritsch, C., Ji, H. P. & Maley, C., Jan 1 2016, In: Nature Medicine. 22, 1, p. 105-113 9 p.Research output: Contribution to journal › Article › peer-review
565 Scopus citations -
When (distant) relatives stay too long: Implications for cancer medicine
Chowell, D., Boddy, A. M., Mallo, D., Tollis, M. & Maley, C., Feb 24 2016, In: Genome biology. 17, 1, 34.Research output: Contribution to journal › Article › peer-review
Open Access2 Scopus citations -
2015
An ecological measure of immune-cancer colocalization as a prognostic factor for breast cancer
Maley, C., Koelble, K., Natrajan, R., Aktipis, C. A. & Yuan, Y., Sep 22 2015, In: Breast Cancer Research. 17, 1, 131.Research output: Contribution to journal › Article › peer-review
Open Access74 Scopus citations -
An ultra-rapid cryo-technique for complex organisms
Irdani, T., Fortunato, A. & Torre, R., Dec 1 2015, In: Cryobiology. 71, 3, p. 391-397 7 p.Research output: Contribution to journal › Article › peer-review
4 Scopus citations -
2013
An evolutionary explanation for the presence of cancer nonstem cells in neoplasms
Sprouffske, K., Aktipis, C. A., Radich, J. P., Carroll, M., Nedelcu, A. M. & Maley, C., Jan 2013, In: Evolutionary Applications. 6, 1, p. 92-101 10 p.Research output: Contribution to journal › Article › peer-review
Open Access27 Scopus citations -
2012
Dispersal evolution in neoplasms: The role of disregulated metabolism in the evolution of cell motility
Aktipis, C. A., Maley, C. & Pepper, J. W., Feb 2012, In: Cancer Prevention Research. 5, 2, p. 266-275 10 p.Research output: Contribution to journal › Article › peer-review
Open Access38 Scopus citations -
2011
Is cooperation viable in mobile organisms? Simple Walk Away rule favors the evolution of cooperation in groups
Aktipis, C. A., Jul 2011, In: Evolution and Human Behavior. 32, 4, p. 263-276 14 p.Research output: Contribution to journal › Article › peer-review
Open Access87 Scopus citations -
Overlooking Evolution: A Systematic Analysis of Cancer Relapse and Therapeutic Resistance Research
Aktipis, C. A., Kwan, S., Johnson, K., Neuberg, S. & Maley, C., 2011, In: PloS one. 6, 11, e26100.Research output: Contribution to journal › Article › peer-review
82 Scopus citations -
Parental investment without kin recognition: Simple conditional rules for parent-offspring behavior
Aktipis, C. A. & Fernandez-Duque, E., May 2011, In: Behavioral Ecology and Sociobiology. 65, 5, p. 1079-1091 13 p.Research output: Contribution to journal › Article › peer-review
Open Access6 Scopus citations -
Risk-Pooling and Herd Survival: An Agent-Based Model of a Maasai Gift-Giving System
Aktipis, C. A., Cronk, L. & de Aguiar, R., Apr 2011, In: Human Ecology. 39, 2, p. 131-140 10 p.Research output: Contribution to journal › Article › peer-review
105 Scopus citations -
2010
Choosing carbon mitigation strategies using ethical deliberation
Bendick, R., Dahlin, K. M., Smoliak, B. V., Kumler, L., Jones, S. J., Aktipis, C. A., Fugate, E., Hertog, R., Moberg, C. & Scott, D., Apr 2010, In: Weather, Climate, and Society. 2, 2, p. 140-147 8 p.Research output: Contribution to journal › Article › peer-review
Open Access4 Scopus citations -
Positive assortment for peer review
Aktipis, C. A. & Thompson-Schill, S. L., Oct 2010, In: Adaptive Behavior. 18, 5, p. 448-450 3 p.Research output: Contribution to journal › Article › peer-review
3 Scopus citations -
The ecology of entrainment: Foundations of coordinated rhythmic movement
Phillips-Silver, J., Aktipis, C. A. & Bryant, G. A., Sep 2010, In: Music Perception. 28, 1, p. 3-14 12 p.Research output: Contribution to journal › Article › peer-review
246 Scopus citations